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Filesystem Organization for Physicists Part 1: The Problem

27 Wednesday Jun 2012

Posted by bwkeller in research

≈ 1 Comment

Tags

ast, astronomy, computers, programming, science, technology

I’ve been warned that I sometimes veer too far in the direction of toolmaker away from the standard path followed by most scientists.  Try as I might, I cannot seem to avoid finding the process of doing science nearly as interesting as the goal of getting that science done. And so, my mind has been orbiting around a problem I suspect is endemic amongst all physicists, if not all scientists.  That problem, captured so nicely by this PhD comic is that of filesystem cruft.  Science, being at it’s core an experimental art, produces for every successful idea a whole panoply of failed experiments, mistakes, and generally messed-up crap.  Being paranoid creatures consumed by our own fears, along with the awareness that serendipity has been a cornerstone of great work, we are loathe to sweep these ill-fated children of the mind into the trash where they (mostly) belong. And so those of us who rely on computers for most of our day-to-day work end up with home directories filled to the brim with old scripts, corrupted data files, a dozen different versions of the same list of values, and other digital detritus.  And this situation makes for errors, confusion, thousand yard stare, anal leakage, and other evils too foul to discuss in polite company.  Just looking at my /home directory on my workstation at the University, I have more than 100,000 files sitting around, waiting for me to stare at them for a quarter hour trying to remember what they were for.

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